PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G341300.1.p
Common NamePRUPE_ppa003517mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 575aa    MW: 62625.9 Da    PI: 6.94
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G341300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000284705021855
                         HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++  L++++ +      +K + a++L +A++YIk Lq
  Prupe.1G341300.1.p 470 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 502
                         6788888888887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.29452501IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-9467510IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.6E-8467508IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.27E-4470506No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    Send to blast
MAEECRESTS CVAISSSSPQ LAQPNWWDLH AAAGAGAAGS QLSSWSNLGI NPWQPQPPQQ  60
QPNQKYSNSS NNCDDVDQDV SISSTSFTNA SNHSSLSVDS SRRLQVADQR SASPNNDMIN  120
GEQVSDNHIW NHVLLLNHAC RSVNGNSDLH HNDHDVGENF LDALSSKSLS TDHVMYEPAC  180
DYLKKLDNST WEFTKYVSAA SNNFNSFEKQ LNGGFMENNN MNNNVNIENE RLTKLSNLVS  240
TWSIAPPEPQ LVMDHDHHHY LKPQAFINND STSCDAQMGN NNITNRNSGS SLFSCYGSKV  300
EAACVAGGGG GGALHGITPS FGNNTNGIEY QIGLNNVNAM VADHHNGKYF YGNGSILPDS  360
YSSCGATSAG ARNFADVISF SSRLGNKSAL VDIHAPKPCF KSSNLSDQYS KKQASSTRVS  420
SGRGQGIANE GKKKRTDDTS SETVLKKPKQ ETSTVSSSVK MQAPKVKLGD RITALQQIVS  480
PFGKTDTASV LYEAIQYIKF LQDQVHVLLS SPYLKTNSHK DPWATDRKDH KGDAKVDLKN  540
KGLCLVPISC TPQVYRENTG SDYWTPTYRG CLYR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222467.10.0hypothetical protein PRUPE_ppa003517mg
TrEMBLM5XDY80.0M5XDY8_PRUPE; Uncharacterized protein
STRINGVIT_01s0010g02070.t011e-156(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.12e-55bHLH family protein